You are viewing an updated version (2021) of the ActiveDriverDB. To view the previous version please visit activedriverdb.org/v2020

TOPBP1 (NM_007027) - DNA topoisomerase II binding protein 1

Dna Topoisomerase 2-Binding Protein 1 Isoform 1

PTM Interaction Network Visualisation

Protein summary

This is preferred isoform of TOPBP1 protein.
TOPBP1: DNA topoisomerase 2-binding protein 1 isoform 1
Description:

This gene encodes a binding protein which interacts with the C-terminal region of topoisomerase II beta. This interaction suggests a supportive role for this protein in the catalytic reactions of topoisomerase II beta through transient breakages of DNA strands. [provided by RefSeq, Jul 2008].

Publication Note:
This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.

Evidence data:
Transcript exon combination :: SRR1803614.145815.1, SRR1660803.23079.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350]

##RefSeq-Attributes-START## MANE Ensembl match :: ENST00000260810.10/ ENSP00000260810.5 RefSeq Select criteria :: based on conservation, expression, longest protein ##RefSeq-Attributes-END##

Strand
-
Chromosome
3
Protein
1522 residues
All mutations
219
PTM sites
72
CDS
133,320,093 - 133,379,971
Transcription
133,319,448 - 133,380,737
42.84% of sequence is predicted to be disordered

Usage summary

Network

drag the background to move whole network
scroll to zoom in and out

PTM site

double click to focus on site's sub-network (or hide it)

Kinases group

double click to show/hide all kinases within the group.

Kinase, PTM site or protein

hover to see a tooltip with additional information
click to stick the tooltip
drag a node to move it and stick in a chosen place
shift + click to free a node which was stuck earlier

External references

Mappings retrieved from NCBI & UniProt.
RefSeq
Entrez
gene: 11073
UniProt
Ensembl